PINDER
Protein-protein docking benchmark with rigorous split design.
Composite
88.9
Experimental validation
Retrospective
Stages
Hit ID
Modalities
protein-general
Task types
protein-protein-docking
Size
dimers: 2,319,564
systems: 267,498
systems: 267,498
License
CC-BY 4.0
First release
2024-07
Last updated
2025-03
Official site
Leaderboard
→ leaderboard
Dataset
→ dataset
Code / GitHub
HuggingFace
→ HF
Paper
PINDER: The Protein Interaction Dataset and Evaluation Resource · Kovtun D, Akdel M, Goncearenco A, et al. · 2024 · paper · doi:10.1101/2024.07.17.603980 · 45 citations
Flags
none
Experts
Groups
Hosted by
Related benchmarks
Rubric (7-criterion)
rigor
5
coverage
5
maintenance
4
adoption
3
quality
5
accessibility
5
industry_relevance
4
Notes
Expected PPI docking standard.