| Broad Institute | lab | USA | 100.0 | 2 |
| Oxford OPIG (Deane Lab) | lab | UK | 100.0 | 4 |
| EMBL-EBI | consortium | UK | 97.4 | 3 |
| MIT CSAIL / Jameel Clinic / Coley Lab | lab | USA | 97.4 | 3 |
| Zitnik Lab | lab | USA | 96.9 | 7 |
| Broad DepMap | lab | USA | 95.0 | 1 |
| Biozentrum Basel / SIB | lab | Switzerland | 95.0 | 3 |
| Wellcome Sanger Institute | lab | UK | 94.8 | 1 |
| SIB Swiss Institute of Bioinformatics | consortium | Switzerland | 94.0 | 2 |
| Insilico Medicine | company | UAE / USA / China | 93.8 | 7 |
| Therapeutics Data Commons | consortium | USA | 93.6 | 20 |
| Open Targets | consortium | UK | 92.4 | 1 |
| MIT Lab for Computational Physiology | lab | USA | 92.4 | 1 |
| Coley Lab (MIT) | lab | USA | 91.7 | 3 |
| CASP Prediction Center | consortium | USA | 90.0 | 2 |
| Dana-Farber Cancer Institute | lab | USA | 89.3 | 2 |
| Recursion Pharmaceuticals | company | USA | 88.8 | 1 |
| Helmholtz Munich (Theis Lab) | lab | Germany | 88.6 | 2 |
| Marks Lab (Debora Marks) | lab | USA | 86.9 | 1 |
| Tatonetti Lab (Cedars-Sinai) | lab | USA | 86.4 | 1 |
| Genentech gRED (ML) | lab | USA | 86.2 | 1 |
| Sander Lab (Harvard/DFCI) | lab | USA | 86.0 | 1 |
| Microsoft Research AI4Science | lab | International | 85.5 | 2 |
| Barzilay Group (MIT) | lab | USA | 85.0 | 1 |
| Valence Labs (Recursion) | company | Canada | 84.3 | 2 |
| Broad CMap | lab | USA | 83.8 | 1 |
| CZ Biohub San Francisco | lab | USA | 83.6 | 1 |
| Materials Project / LBL | lab | USA | 83.3 | 1 |
| NIH NCBI (PubChem) | lab | USA | 83.3 | 1 |
| Polaris Consortium | consortium | International | 82.6 | 2 |
| Sage Bionetworks (DREAM) | consortium | USA | 82.4 | 0 |
| Novartis BR / AIDD | company | Switzerland | 82.1 | 1 |
| GSK Computational Biology | company | UK | 82.1 | 1 |
| The Institute of Cancer Research | lab | UK | 81.7 | 1 |
| Oxford OATML | lab | UK | 81.2 | 1 |
| AstraZeneca AIDD | company | UK/Sweden | 81.2 | 1 |
| FDA CDER | lab | USA | 81.2 | 1 |
| Google Research (Kearnes) | lab | USA | 81.0 | 1 |
| NIH NCATS | lab | USA | 80.7 | 1 |
| Rostlab (TU München) | lab | Germany | 80.2 | 1 |
| Isomorphic Labs | company | UK | 80.0 | 1 |
| CZI Science | consortium | USA | 80.0 | 2 |
| Matter Lab (UToronto) | lab | Canada | 79.0 | 1 |
| AlQuraishi Lab (Columbia) | lab | USA | 78.6 | 1 |
| NCI CPTAC | consortium | USA | 78.3 | 1 |
| US EPA CCTE | lab | USA | 77.4 | 1 |
| Pfizer | company | USA | 77.1 | 1 |
| UC Berkeley (Song / Abbeel) | lab | USA | 77.1 | 1 |
| Open Systems Pharmacology consortium | consortium | International | 75.0 | 1 |
| Open Problems Consortium | consortium | International | 74.8 | 1 |
| Fu Lab (RPI) | lab | USA | 74.5 | 3 |
| Certara / Simcyp | company | UK/USA | 74.5 | 1 |
| Sun Lab (Georgia Tech) | lab | USA | 74.3 | 1 |
| Vector Institute | consortium | Canada | 74.0 | 1 |
| CAFA Consortium | consortium | International | 74.0 | 1 |
| Mila (Tang Lab) | lab | Canada | 74.0 | 1 |
| VantAI | company | USA | 73.6 | 2 |
| Pande Lab (Stanford, alumni network) | lab | USA | 73.1 | 1 |
| Princeton Chemistry (Doyle, ex) | lab | USA | 72.6 | 1 |
| LIT Strasbourg (Rognan) | lab | France | 72.6 | 1 |
| DeepChem Community | consortium | International | 72.4 | 2 |
| Bo Wang Lab (Vector/UofT) | lab | Canada | 72.1 | 1 |
| Gladstone Institutes | lab | USA | 71.7 | 1 |
| SIMM, Chinese Academy of Sciences | lab | China | 71.2 | 2 |
| Relay Therapeutics | company | USA | 71.2 | 1 |
| Gray Lab (Johns Hopkins) | lab | USA | 71.0 | 1 |
| Eindhoven AI Molecular Engineering (Grisoni Lab) | lab | Netherlands | 69.5 | 1 |
| BenevolentAI | company | UK | 68.8 | 1 |
| Hernández-Lobato Group (Cambridge) | lab | UK | 68.6 | 1 |
| Shoichet Lab (UCSF) | lab | USA | 68.3 | 1 |
| Univ Lille (Lensink) | lab | France | 66.7 | 1 |
| IBM Research Europe (CAPRI-era) | lab | Belgium | 66.4 | 1 |
| ML2Health | consortium | USA | 66.2 | 1 |
| Song Lab (Berkeley) | lab | USA | 65.7 | 1 |
| PKU AIDD / SIMM CAS / Tsinghua | consortium | China | 65.0 | 0 |
| ClawBio | consortium | International | 64.3 | 1 |
| Biostochastics LLC | company | USA | 59.3 | 1 |
| MedBioinformatics Solutions | company | Spain | 55.2 | 1 |
| Tübingen (Boeckler Lab) | lab | Germany | 54.0 | 1 |